Protein Info for b1087 in Escherichia coli BW25113

Name: yceF
Annotation: orf, hypothetical protein (VIMSS)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 194 TIGR00172: septum formation protein Maf" amino acids 1 to 185 (185 residues), 249.3 bits, see alignment E=9.1e-79 PF02545: Maf" amino acids 3 to 186 (184 residues), 185.9 bits, see alignment E=3.2e-59

Best Hits

Swiss-Prot: 100% identical to NTPPB_SHISS: 7-methyl-GTP pyrophosphatase (yceF1) from Shigella sonnei (strain Ss046)

KEGG orthology group: None (inferred from 100% identity to eco:b1087)

MetaCyc: 100% identical to m7GTP pyrophosphatase (Escherichia coli K-12 substr. MG1655)
RXN0-7079

Predicted SEED Role

"FIG146278: Maf/YceF/YhdE family protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See P0A729 at UniProt or InterPro

Protein Sequence (194 amino acids)

>b1087 orf, hypothetical protein (VIMSS) (Escherichia coli BW25113)
MPKLILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQLVLRLAQEKAQSLASRY
PDHLIIGSDQVCVLDGEITGKPLTEENARLQLRKASGNIVTFYTGLALFNSANGHLQTEV
EPFDVHFRHLSEAEIDNYVRKEHPLHCAGSFKSEGFGITLFERLEGRDPNTLVGLPLIAL
CQMLRREGKNPLMG