Gene info for b0542 in Escherichia coli BW25113

Name: renD
Annotation: orf, hypothetical protein (VIMSS)
Type 7: Pseudogene derived from a protein-coding gene
Located on scaffold 7023, + strand, nucleotides 565,907 to 565,999
See nucleotide sequence around b0542 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc

Nearby Genes

500 ntargU and intD are separated by 15 nucleotidesintD and xisD overlap by 121 nucleotidesxisD and ybcC are separated by 18 nucleotidesybcC and peaD overlap by 1 nucleotidespeaD and renD overlap by 4 nucleotidesrenD and insE are separated by 65 nucleotidesinsE and insF-3 overlap by 4 nucleotidesinsF-3 and emrE are separated by 310 nucleotidesemrE and ybcK are separated by 254 nucleotidesybcK and ybcL are separated by 464 nucleotides b0536: argU - tRNA-Arg (NCBI), at 563,946 to 564,022 argU b0537: intD - DLP12 prophage; predicted integrase (NCBI), at 564,038 to 565,201 intD b4633: xisD - no description, at 565,081 to 565,302 xisD b0539: ybcC - DLP12 prophage; predicted exonuclease (RefSeq), at 565,321 to 565,599 ybcC b4508: peaD - putative sensory transduction regulator (VIMSS), at 565,599 to 565,910 peaD b0542: renD - orf, hypothetical protein (VIMSS), at 565,907 to 565,999 renD b0540: insE - IS3 element protein InsE (RefSeq), at 566,065 to 566,364 insE b0541: insF-3 - DLP12 prophage; IS3 element protein InsF (NCBI), at 566,361 to 567,227 insF-3 b0543: emrE - multidrug efflux protein (NCBI), at 567,538 to 567,870 emrE b0544: ybcK - DLP12 prophage; predicted recombinase (NCBI), at 568,125 to 569,651 ybcK b0545: ybcL - DLP12 prophage; predicted kinase inhibitor (NCBI), at 570,116 to 570,667 ybcL
Locus Name Description Strand Phenotype
b0536 argU tRNA-Arg (NCBI) + no data
b0537 intD DLP12 prophage; predicted integrase (NCBI) - sig.
b4633 xisD no description - sig.
b0539 ybcC DLP12 prophage; predicted exonuclease (RefSeq) - insig.
b4508 peaD putative sensory transduction regulator (VIMSS) + sig.
b0542 renD orf, hypothetical protein (VIMSS) + insig.
b0540 insE IS3 element protein InsE (RefSeq) + no data
b0541 insF-3 DLP12 prophage; IS3 element protein InsF (NCBI) + no data
b0543 emrE multidrug efflux protein (NCBI) + strong
b0544 ybcK DLP12 prophage; predicted recombinase (NCBI) + no data
b0545 ybcL DLP12 prophage; predicted kinase inhibitor (NCBI) + sig.

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