Gene info for b0218 in Escherichia coli BW25113

Name: yafU
Annotation: predicted inner membrane protein (RefSeq)
Type 7: Pseudogene derived from a protein-coding gene
Located on scaffold 7023, - strand, nucleotides 238,746 to 239,102
See nucleotide sequence around b0218 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc

Nearby Genes

500 ntrnhA and dnaQ are separated by 64 nucleotidesdnaQ and aspV are separated by 132 nucleotidesaspV and yafT are separated by 327 nucleotidesyafT and ykfM are separated by 136 nucleotidesykfM and yafU are separated by 9 nucleotidesyafU and yafF are separated by 3 nucleotidesyafF and yafV are separated by 40 nucleotidesyafV and ivy are separated by 153 nucleotidesivy and yafH are separated by 42 nucleotidesyafH and lpcA are separated by 239 nucleotides b0214: rnhA - ribonuclease H (NCBI), at 235,535 to 236,002 rnhA b0215: dnaQ - DNA polymerase III subunit epsilon (NCBI), at 236,067 to 236,798 dnaQ b0216: aspV - tRNA-Asp (NCBI), at 236,931 to 237,007 aspV b0217: yafT - predicted aminopeptidase (NCBI), at 237,335 to 238,120 yafT b4586: ykfM - hypothetical protein, no homologs (RefSeq), at 238,257 to 238,736 ykfM b0218: yafU - predicted inner membrane protein (RefSeq), at 238,746 to 239,102 yafU b4503: yafF - no description, at 239,106 to 239,378 yafF b0219: yafV - predicted C-N hydrolase family amidase, NAD(P)-binding (NCBI), at 239,419 to 240,189 yafV b0220: ivy - inhibitor of vertebrate C-lysozyme (NCBI), at 240,343 to 240,816 ivy b0221: yafH - putative acyl-CoA dehydrogenase (EC 1.3.99.-) (VIMSS), at 240,859 to 243,303 yafH b0222: lpcA - phosphoheptose isomerase (NCBI), at 243,543 to 244,121 lpcA
Locus Name Description Strand Phenotype
b0214 rnhA ribonuclease H (NCBI) - no data
b0215 dnaQ DNA polymerase III subunit epsilon (NCBI) + no data
b0216 aspV tRNA-Asp (NCBI) + strong
b0217 yafT predicted aminopeptidase (NCBI) + sig.
b4586 ykfM hypothetical protein, no homologs (RefSeq) - no data
b0218 yafU predicted inner membrane protein (RefSeq) - insig.
b4503 yafF no description + insig.
b0219 yafV predicted C-N hydrolase family amidase, NAD(P)-binding (NCBI) - insig.
b0220 ivy inhibitor of vertebrate C-lysozyme (NCBI) + insig.
b0221 yafH putative acyl-CoA dehydrogenase (EC 1.3.99.-) (VIMSS) - strong
b0222 lpcA phosphoheptose isomerase (NCBI) + strong

Or browse nearby genes