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  • Negative cofitness for PP_5433 from Pseudomonas putida KT2440

    putative NADH:ubiquinone oxidoreductase subunit 2
    SEED: NADH:ubiquinone oxidoreductase subunit 2 (chain N)

    Computing cofitness values with 1005 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_0904 InaA protein -0.22
    2 PP_3286 DNA-binding transcriptional repressor PaaX(phenylacetyl-CoA) -0.20
    3 PP_3603 Transcriptional regulator, GntR family -0.18
    4 PP_0311 putative dimethylglycine dehydrogenase subunit -0.18
    5 PP_0413 Polyamine ABC transporter, permease protein -0.17
    6 PP_2493 RadC family protein -0.17
    7 PP_3358 hydroxycinnamoyl-CoA hydratase-lyase (EC 4.1.2.61) (from data) -0.16
    8 PP_3356 p-coumarate CoA-ligase (EC 6.2.1.12) (from data) -0.16
    9 PP_1110 serine acetyltransferase -0.15
    10 PP_1303 Sulfate adenylyltransferase subunit 2 -0.15
    11 PP_2354 Sensory box histidine kinase/response regulator -0.15
    12 PP_3691 DNA helicase-related protein -0.15
    13 PP_0611 Type IV pili biogenesis protein PilE -0.15
    14 PP_0612 FAD-dependent glycine/D-amino acid oxidase -0.15
    15 PP_5035 Histidine utilization repressor -0.15
    16 PP_0965 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) -0.15
    17 PP_4923 Outer membrane efflux protein -0.15
    18 PP_1304 sulfate adenylyltransferase subunit 1/adenylyl-sulfate kinase -0.14
    19 PP_0421 Anthranilate phosphoribosyltransferase -0.14
    20 PP_4890 ATP phosphoribosyltransferase regulatory subunit -0.14

    Or look for positive cofitness