• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for PP_5350 from Pseudomonas putida KT2440

    Transcriptional regulator, RpiR family
    SEED: Phosphogluconate repressor HexR, RpiR family

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1807 2-dehydro-3-deoxyphosphooctonate aldolase -0.36
    2 PP_4872 putative enzyme of unknown function -0.34
    3 PP_1798 Outer membrane efflux protein -0.34
    4 PP_1797 HlyD family secretion protein -0.33
    5 PP_3627 conserved protein of unknown function -0.33
    6 PP_1627 conserved protein of unknown function -0.32
    7 PP_5283 periplasmic dipeptide transport protein -0.31
    8 PP_1523 conserved protein of unknown function -0.30
    9 PP_1918 septation protein -0.30
    10 PP_0941 putative ribosome associated protein -0.30
    11 PP_0066 Ribosomal RNA small subunit methyltransferase B -0.30
    12 PP_4971 putative Outer membrane-bound lytic murein transglycolase A -0.30
    13 PP_0540 conserved inner membrane protein -0.29
    14 PP_5284 UPF0758 protein PP_5284 -0.28
    15 PP_5200 proline aminopeptidase P II -0.28
    16 PP_1789 Hydrolase, haloacid dehalogenase-like family -0.28
    17 PP_2096 fused 23S rRNA m2G2445 methyltransferase and 23S rRNA m7G2069 methyltransferase -0.27
    18 PP_2148 transcription-repair coupling factor -0.27
    19 PP_1279 Probable alginate O-acetylase AlgJ -0.26
    20 PP_1075 glycerol kinase -0.26

    Or look for positive cofitness