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  • Negative cofitness for PP_5342 from Pseudomonas putida KT2440

    Transcriptional regulator, GntR family
    SEED: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
    KEGG: GntR family transcriptional regulator / MocR family aminotransferase

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_0439 conserved protein of unknown function -0.19
    2 PP_3907 conserved protein of unknown function -0.18
    3 PP_5494 protein of unknown function -0.18
    4 PP_3106 conserved protein of unknown function -0.18
    5 PP_4943 putative Glycosyl transferase -0.18
    6 PP_0123 DNA polymerase I, 5 -0.18
    7 PP_4722 Transcription elongation factor GreA -0.18
    8 PP_4590 conserved protein of unknown function -0.17
    9 PP_4946 sodium/L-proline transporter -0.17
    10 PP_2080 NAD-specific glutamate dehydrogenase -0.17
    11 PP_4253 cytochrome c oxidase subunit, cbb3-type -0.17
    12 PP_1224 periplasmic subunit of the TolQRA transport system -0.17
    13 PP_0697 ribosomal-protein-S18-alanine N-acetyltransferase -0.17
    14 PP_1490 Probable biofilm formation methyltransferase WspC -0.17
    15 PP_2932 Amidase family protein -0.16
    16 PP_3214 conserved exported protein of unknown function -0.16
    17 PP_4940 Putative glycosyltransferase -0.16
    18 PP_1786 putative Glycosyl transferase -0.16
    19 PP_2319 conserved protein of unknown function -0.16
    20 PP_1325 putative lipoprotein -0.16

    Or look for positive cofitness