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  • Negative cofitness for PP_5338 from Pseudomonas putida KT2440

    aspartate ammonia-lyase
    SEED: Aspartate ammonia-lyase (EC 4.3.1.1)
    KEGG: aspartate ammonia-lyase

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_4246 Periplasmic binding protein -0.32
    2 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -0.30
    3 PP_1304 sulfate adenylyltransferase subunit 1/adenylyl-sulfate kinase -0.26
    4 PP_1656 ATP:GTP 3'-pyrophosphotransferase -0.25
    5 PP_5699 putative iron uptake protein -0.25
    6 PP_4971 putative Outer membrane-bound lytic murein transglycolase A -0.25
    7 PP_0570 lipoprotein of unknown function -0.24
    8 PP_4217 outer membrane ferripyoverdine receptor FpvA, TonB-dependent -0.24
    9 PP_0066 Ribosomal RNA small subunit methyltransferase B -0.24
    10 PP_1301 quality control serine endoprotease DegS -0.23
    11 PP_1798 Outer membrane efflux protein -0.23
    12 PP_4495 aromatic amino acid transport protein -0.22
    13 PP_1803 UDP-sugar epimerase -0.22
    14 PP_0928 K+-dependent Na+/Ca+ exchanger related-protein -0.22
    15 PP_5603 putative FAD dependent oxidoreductase -0.22
    16 PP_4924 Serine protease, subtilase family -0.22
    17 PP_0049 conserved protein of unknown function -0.22
    18 PP_1800 Oxidoreductase Rmd -0.22
    19 PP_t49 tRNA-Met -0.21
    20 PP_1780 putative mannosyltransferase -0.21

    Or look for positive cofitness