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  • Negative cofitness for PP_5310 from Pseudomonas putida KT2440

    junction-specific ATP-dependent DNA helicase
    SEED: ATP-dependent DNA helicase RecG (EC 3.6.1.-)
    KEGG: ATP-dependent DNA helicase RecG

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_2714 Sensor histidine kinase -0.35
    2 PP_3376 putative phosphonate dehydrogenase -0.34
    3 PP_3790 diaminopimelate epimerase -0.33
    4 PP_0506 putative ABC efflux transporter, permease protein -0.32
    5 PP_1109 Transcriptional regulator, GntR family -0.31
    6 PP_1792 Glycosyl transferase, group 2 family protein -0.31
    7 PP_1348 putative MutT/nudix family protein/thiamine-phosphate pyrophosphorylase -0.31
    8 PP_4922 Phosphomethylpyrimidine synthase -0.31
    9 PP_1301 quality control serine endoprotease DegS -0.29
    10 PP_4924 Serine protease, subtilase family -0.28
    11 PP_0033 putative undecaprenyl-glycosyl transferase -0.28
    12 PP_1110 serine acetyltransferase -0.28
    13 PP_5060 conserved protein of unknown function -0.28
    14 PP_4531 conserved exported protein of unknown function -0.26
    15 PP_4078 conserved protein of unknown function -0.26
    16 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding -0.26
    17 PP_5104 thiazole synthase -0.26
    18 PP_2287 Phage internal core protein -0.25
    19 PP_0906 putative Multidrug efflux RND transporter -0.25
    20 PP_4246 Periplasmic binding protein -0.25

    Or look for positive cofitness