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  • Negative cofitness for PP_5293 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: FIG00955116: hypothetical protein
    KEGG: hypothetical protein

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1577 Phage tail tape meausure protein, lambda family -0.17
    2 PP_0355 Response regulator -0.17
    3 PP_0804 Protein secretion ABC efflux system, permease and ATP-binding protein -0.17
    4 PP_1623 RNA polymerase, sigma S (sigma 38) factor -0.17
    5 PP_4386 flagellar basal-body rod protein FlgF -0.17
    6 PP_3393 CAIB/BAIF family protein -0.16
    7 PP_4391 flagellar basal-body rod protein FlgB -0.16
    8 PP_0490 formate dehydrogenase-O, beta subunit -0.16
    9 PP_4390 flagellar basal-body rod protein FlgC -0.16
    10 PP_0806 putative Surface adhesion protein -0.16
    11 PP_5053 Protein-export protein SecB -0.16
    12 PP_4361 Flagellar hook-length control protein FliK -0.15
    13 PP_0264 Sensor histidine kinase -0.15
    14 PP_4385 flagellar basal-body rod protein FlgG -0.15
    15 PP_0805 Outer membrane efflux protein -0.15
    16 PP_4378 flagellin, filament structural protein -0.15
    17 PP_4396 conserved protein of unknown function -0.15
    18 PP_2971 transposase -0.14
    19 PP_4353 Flagellar biosynthetic protein fliR -0.14
    20 PP_4376 flagellar filament capping protein -0.14

    Or look for positive cofitness