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  • Negative cofitness for PP_5259 from Pseudomonas putida KT2440

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1803 UDP-sugar epimerase -0.40
    2 PP_1777 phosphomannomutase -0.40
    3 PP_1800 Oxidoreductase Rmd -0.39
    4 PP_1776 Mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase -0.39
    5 PP_1805 Polysaccharide biosynthesis protein -0.37
    6 PP_1798 Outer membrane efflux protein -0.37
    7 PP_1801 Glycosyl transferase WbpY -0.37
    8 PP_1780 putative mannosyltransferase -0.37
    9 PP_1799 GDP-mannose 4,6-dehydratase -0.37
    10 PP_1627 conserved protein of unknown function -0.37
    11 PP_1802 glycosyl transferase -0.37
    12 PP_0540 conserved inner membrane protein -0.36
    13 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -0.36
    14 PP_0066 Ribosomal RNA small subunit methyltransferase B -0.35
    15 PP_1663 conserved exported protein of unknown function -0.34
    16 PP_1626 DNA mismatch repair protein MutS -0.34
    17 PP_1871 Protease HtpX -0.34
    18 PP_1775 Metallo-beta-lactamase family protein -0.33
    19 PP_3627 conserved protein of unknown function -0.33
    20 PP_4171 conserved exported protein of unknown function -0.33

    Or look for positive cofitness