• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for PP_5227 from Pseudomonas putida KT2440

    diaminopimelate decarboxylase
    SEED: Diaminopimelate decarboxylase (EC 4.1.1.20)
    KEGG: diaminopimelate decarboxylase

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1646 putative Thioredoxin -0.31
    2 PP_2379 putative cytochrome oxidase biogenesis protein -0.30
    3 PP_4208 RNA polymerase sigma-70 factor, ECF subfamily -0.28
    4 PP_4838 Outer membrane copper receptor OprC -0.27
    5 PP_3415 Transcriptional regulator, LacI family -0.26
    6 PP_1317 Ubiquinol-cytochrome c reductase iron-sulfur subunit -0.26
    7 PP_3633 putative ArgC like N-acetyl-gamma-glutamyl-phosphate reductase -0.25
    8 PP_0971 conserved protein of unknown function -0.25
    9 PP_5428 conserved exported protein of unknown function -0.24
    10 PP_1318 Cytochrome b -0.24
    11 PP_0913 conserved exported protein of unknown function -0.24
    12 PP_0984 conserved membrane protein of unknown function -0.24
    13 PP_1034 multicopper oxidase -0.24
    14 PP_4379 Beta-ketoacyl-acyl-carrier-protein synthase I -0.23
    15 PP_3801 putative Cation ABC transporter, periplasmic cation-binding protein -0.23
    16 PP_5200 proline aminopeptidase P II -0.23
    17 PP_4505 Sensor histidine kinase -0.23
    18 PP_0951 Ribosome hibernation promoting factor -0.23
    19 PP_0137 glutamate/aspartate-proton DAACS transporter -0.23
    20 PP_4819 conserved protein of unknown function -0.22

    Or look for positive cofitness