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  • Negative cofitness for PP_5181 from Pseudomonas putida KT2440

    spermidine/putrescine ABC transporter - periplasmic subunit
    SEED: Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2)
    KEGG: putrescine transport system substrate-binding protein

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_5283 periplasmic dipeptide transport protein -0.41
    2 PP_1798 Outer membrane efflux protein -0.41
    3 PP_1627 conserved protein of unknown function -0.40
    4 PP_1663 conserved exported protein of unknown function -0.40
    5 PP_0540 conserved inner membrane protein -0.39
    6 PP_0066 Ribosomal RNA small subunit methyltransferase B -0.38
    7 PP_2148 transcription-repair coupling factor -0.38
    8 PP_1777 phosphomannomutase -0.37
    9 PP_3627 conserved protein of unknown function -0.37
    10 PP_1776 Mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase -0.37
    11 PP_1797 HlyD family secretion protein -0.36
    12 PP_1871 Protease HtpX -0.36
    13 PP_1800 Oxidoreductase Rmd -0.35
    14 PP_1774 conserved exported protein of unknown function -0.35
    15 PP_1799 GDP-mannose 4,6-dehydratase -0.35
    16 PP_1801 Glycosyl transferase WbpY -0.35
    17 PP_1803 UDP-sugar epimerase -0.35
    18 PP_1204 putative Lipoprotein -0.34
    19 PP_1805 Polysaccharide biosynthesis protein -0.34
    20 PP_1780 putative mannosyltransferase -0.34

    Or look for positive cofitness