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  • Negative cofitness for PP_5178 from Pseudomonas putida KT2440

    spermidine/putrescine ABC transporter - inner membrane subunit
    SEED: Putrescine transport system permease protein PotH (TC 3.A.1.11.2)
    KEGG: putrescine transport system permease protein

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1798 Outer membrane efflux protein -0.46
    2 PP_1627 conserved protein of unknown function -0.46
    3 PP_1663 conserved exported protein of unknown function -0.45
    4 PP_0540 conserved inner membrane protein -0.44
    5 PP_5283 periplasmic dipeptide transport protein -0.43
    6 PP_1777 phosphomannomutase -0.42
    7 PP_2148 transcription-repair coupling factor -0.42
    8 PP_1776 Mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase -0.41
    9 PP_3627 conserved protein of unknown function -0.41
    10 PP_1871 Protease HtpX -0.41
    11 PP_0066 Ribosomal RNA small subunit methyltransferase B -0.41
    12 PP_1800 Oxidoreductase Rmd -0.40
    13 PP_1774 conserved exported protein of unknown function -0.40
    14 PP_1803 UDP-sugar epimerase -0.40
    15 PP_1799 GDP-mannose 4,6-dehydratase -0.40
    16 PP_1204 putative Lipoprotein -0.39
    17 PP_1801 Glycosyl transferase WbpY -0.39
    18 PP_1797 HlyD family secretion protein -0.39
    19 PP_4171 conserved exported protein of unknown function -0.39
    20 PP_1805 Polysaccharide biosynthesis protein -0.39

    Or look for positive cofitness