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  • Negative cofitness for PP_5175 from Pseudomonas putida KT2440

    HlyD family secretion protein
    SEED: Probable RND efflux membrane fusion protein

    Computing cofitness values with 1005 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_0506 putative ABC efflux transporter, permease protein -0.19
    2 PP_2758 putative Ribose ABC transporter, periplasmic ribose-binding protein -0.17
    3 PP_2348 Sensor histidine kinase -0.17
    4 PP_5200 proline aminopeptidase P II -0.16
    5 PP_1511 conserved protein of unknown function -0.16
    6 PP_1225 7-carboxy-7-deazaguanine synthase -0.16
    7 PP_5202 putative cell division protein -0.16
    8 PP_2623 conserved protein of unknown function -0.16
    9 PP_t10 tRNA-Pro -0.15
    10 PP_4060 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase -0.15
    11 PP_3244 Magnesium transporter, MgtC family -0.15
    12 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding -0.15
    13 PP_0878 dipeptide ABC transporter, binding subunit -0.15
    14 PP_4922 Phosphomethylpyrimidine synthase -0.15
    15 PP_4446 putative Group II intron-encoding maturase -0.14
    16 PP_3522 conserved protein of unknown function -0.14
    17 PP_1348 putative MutT/nudix family protein/thiamine-phosphate pyrophosphorylase -0.14
    18 PP_2294 conserved exported protein of unknown function -0.14
    19 PP_3097 conserved protein of unknown function -0.14
    20 PP_5104 thiazole synthase -0.14

    Or look for positive cofitness