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  • Negative cofitness for PP_5083 from Pseudomonas putida KT2440

    putative Type IV pili biogenesis protein PilM
    SEED: Type IV pilus biogenesis protein PilM
    KEGG: type IV pilus assembly protein PilM

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_2000 amidophosphoribosyl transferase -0.23
    2 PP_5399 conserved protein of unknown function -0.19
    3 PP_4999 dihydroorotase-like protein -0.19
    4 PP_0368 putative Acyl-CoA dehydrogenase -0.18
    5 PP_5028 proline iminopeptidase -0.18
    6 PP_2231 putative permease of the drug/metabolite transporter (DMT) superfamily -0.18
    7 PP_0691 Glutamate 5-kinase -0.18
    8 PP_1629 Protein RecA -0.17
    9 PP_4724 Carbamoyl-phosphate synthase small chain -0.17
    10 PP_5515 protein of unknown function -0.17
    11 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex -0.17
    12 PP_3831 conserved protein of unknown function -0.17
    13 PP_0632 leader peptidase/N-methyltransferase -0.17
    14 PP_5322 putative metal ion transporter -0.17
    15 PP_0719 ribosome-associated potassium-dependent informational ATP/GTPase -0.16
    16 PP_1626 DNA mismatch repair protein MutS -0.16
    17 PP_5330 Major facilitator family transporter -0.16
    18 PP_0339 Pyruvate dehydrogenase E1 component -0.16
    19 PP_3103 conserved protein of unknown function -0.16
    20 PP_4700 pantothenate synthetase -0.15

    Or look for positive cofitness