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  • Negative cofitness for PP_5071 from Pseudomonas putida KT2440

    putative DNA-binding transcriptional regulator
    SEED: LysR family transcriptional regulator YnfL

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_4785 conserved exported protein of unknown function -0.17
    2 PP_2943 putative Cytochrome c551 peroxidase -0.17
    3 PP_4710 tRNA pseudouridine 55 synthase -0.16
    4 PP_4654 tRNA/tmRNA (uracil-C(5))-methyltransferase -0.16
    5 PP_4478 N-succinylglutamate 5-semialdehyde dehydrogenase -0.16
    6 PP_1099 Cold shock protein CapB -0.16
    7 PP_2107 conserved protein of unknown function -0.16
    8 PP_4949 putative peptidase, TldD/PmbA family -0.16
    9 PP_1226 pre-queuosine 0 synthase -0.15
    10 PP_2944 Sensor histidine kinase -0.15
    11 PP_2169 tRNA-dihydrouridine synthase A -0.15
    12 PP_2645 magnesium transporter, ATP-dependent -0.15
    13 PP_5294 Ribonuclease PH -0.14
    14 PP_3140 Glycosyl transferase, group 2 family protein -0.14
    15 PP_5619 protein of unknown function -0.14
    16 PP_5350 Transcriptional regulator, RpiR family -0.14
    17 PP_2088 RNA polymerase sigma factor SigX -0.14
    18 PP_4314 conserved protein of unknown function -0.13
    19 PP_0832 S-adenosylmethionine:tRNA ribosyltransferase-isomerase -0.13
    20 PP_2203 conserved protein of unknown function -0.13

    Or look for positive cofitness