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  • Negative cofitness for PP_5063 from Pseudomonas putida KT2440

    betaine aldehyde dehydrogenase, NAD-dependent
    SEED: Betaine aldehyde dehydrogenase (EC 1.2.1.8)
    KEGG: betaine-aldehyde dehydrogenase

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_4217 outer membrane ferripyoverdine receptor FpvA, TonB-dependent -0.30
    2 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -0.30
    3 PP_4971 putative Outer membrane-bound lytic murein transglycolase A -0.28
    4 PP_1798 Outer membrane efflux protein -0.27
    5 PP_0066 Ribosomal RNA small subunit methyltransferase B -0.26
    6 PP_4495 aromatic amino acid transport protein -0.26
    7 PP_1800 Oxidoreductase Rmd -0.26
    8 PP_0928 K+-dependent Na+/Ca+ exchanger related-protein -0.26
    9 PP_1776 Mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase -0.25
    10 PP_1791 putative Aldolase/synthase -0.25
    11 PP_1627 conserved protein of unknown function -0.25
    12 PP_1780 putative mannosyltransferase -0.25
    13 PP_1803 UDP-sugar epimerase -0.25
    14 PP_1802 glycosyl transferase -0.25
    15 PP_1799 GDP-mannose 4,6-dehydratase -0.24
    16 PP_1801 Glycosyl transferase WbpY -0.24
    17 PP_1790 putative Acylneuraminate cytidylyltransferase -0.24
    18 PP_0540 conserved inner membrane protein -0.24
    19 PP_t49 tRNA-Met -0.24
    20 PP_1301 quality control serine endoprotease DegS -0.23

    Or look for positive cofitness