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  • Negative cofitness for PP_5006 from Pseudomonas putida KT2440

    Transcriptional regulator, TetR family
    SEED: Transcriptional regulator PhaD

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_4549 long-chain-fatty-acid/CoA ligase -0.45
    2 PP_0765 putative adhesin (DUF1302) (from data) -0.44
    3 PP_0766 adhesin-associated sorting protein (DUF1329) (from data) -0.40
    4 PP_4817 MaoC domain protein -0.39
    5 PP_4550 long-chain-fatty-acid/CoA ligase -0.36
    6 PP_2137 beta-ketoadipyl CoA thiolase, beta component -0.36
    7 PP_2136 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase -0.32
    8 PP_2019 adhesin-associated MmpL efflux pump (from data) -0.32
    9 PP_0767 Transcriptional regulator, LuxR family -0.31
    10 PP_4116 isocitrate lyase -0.29
    11 PP_1351 putative 2-dehydropantoate 2-reductase -0.27
    12 PP_1968 TetR family transcriptional regulator -0.27
    13 PP_5659 protein of unknown function -0.26
    14 PP_0370 Acyl-CoA dehydrogenase family protein -0.25
    15 PP_0356 malate synthase G -0.25
    16 PP_2018 adhesin-associated BNR repeat protein (from data) -0.25
    17 PP_1182 Sensor histidine kinase -0.24
    18 PP_3731 Transcriptional regulator, TetR family -0.24
    19 PP_4545 beta-ketodecanoyl-(Acyl-carrier-protein) synthase -0.24
    20 PP_2356 putative Phytochrome family protein -0.22

    Or look for positive cofitness