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  • Negative cofitness for PP_5003 from Pseudomonas putida KT2440

    poly(3-hydroxyalkanoate) polymerase 1
    SEED: Polyhydroxyalkanoic acid synthase
    KEGG: polyhydroxyalkanoate synthase

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_4549 long-chain-fatty-acid/CoA ligase -0.52
    2 PP_0765 putative adhesin (DUF1302) (from data) -0.48
    3 PP_0766 adhesin-associated sorting protein (DUF1329) (from data) -0.47
    4 PP_4817 MaoC domain protein -0.44
    5 PP_4550 long-chain-fatty-acid/CoA ligase -0.41
    6 PP_2137 beta-ketoadipyl CoA thiolase, beta component -0.39
    7 PP_0767 Transcriptional regulator, LuxR family -0.37
    8 PP_2019 adhesin-associated MmpL efflux pump (from data) -0.37
    9 PP_4116 isocitrate lyase -0.36
    10 PP_2136 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase -0.34
    11 PP_1351 putative 2-dehydropantoate 2-reductase -0.33
    12 PP_0356 malate synthase G -0.32
    13 PP_5659 protein of unknown function -0.32
    14 PP_1182 Sensor histidine kinase -0.31
    15 PP_2018 adhesin-associated BNR repeat protein (from data) -0.30
    16 PP_4545 beta-ketodecanoyl-(Acyl-carrier-protein) synthase -0.29
    17 PP_1968 TetR family transcriptional regulator -0.26
    18 PP_1181 DNA-binding response regulator -0.25
    19 PP_3731 Transcriptional regulator, TetR family -0.25
    20 PP_2356 putative Phytochrome family protein -0.25

    Or look for positive cofitness