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  • Negative cofitness for PP_5000 from Pseudomonas putida KT2440

    peptidase component of the ATP-dependent HslVU protease
    SEED: ATP-dependent protease HslV (EC 3.4.25.-)
    KEGG: ATP-dependent HslUV protease, peptidase subunit HslV

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_5039 conserved protein of unknown function -0.14
    2 PP_0217 delta-9 fatty acid desaturase -0.14
    3 PP_1571 conserved protein of unknown function -0.14
    4 PP_1295 ATP-dependent RNA helicase RhlB -0.14
    5 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -0.13
    6 PP_5410 Transcriptional regulator, DeoR family -0.13
    7 PP_0373 conserved membrane protein of unknown function -0.13
    8 PP_5314 Rubredoxin-NAD(+) reductase -0.13
    9 PP_4468 Transcriptional regulator, Cro/CI family -0.13
    10 PP_1936 conserved membrane protein of unknown function -0.13
    11 PP_2197 conserved exported protein of unknown function -0.13
    12 PP_3421 Sensor histidine kinase -0.13
    13 PP_3898 conserved protein of unknown function -0.13
    14 PP_5395 conserved protein of unknown function -0.13
    15 PP_0944 fumarate hydratase (class 2) -0.13
    16 PP_0015 putative transposon protein -0.13
    17 PP_1118 Recombinase-related protein -0.12
    18 PP_0093 putative zinc protease protein -0.12
    19 PP_0830 Acetyltransferase, GNAT family -0.12
    20 PP_3565 Transporter, LysE family -0.12

    Or look for positive cofitness