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  • Negative cofitness for PP_4971 from Pseudomonas putida KT2440

    putative Outer membrane-bound lytic murein transglycolase A
    SEED: Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-)
    KEGG: membrane-bound lytic murein transglycosylase A

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1786 putative Glycosyl transferase -0.50
    2 PP_4939 conserved protein of unknown function -0.47
    3 PP_1320 stringent starvation protein A -0.46
    4 PP_4710 tRNA pseudouridine 55 synthase -0.45
    5 PP_5064 choline dehydrogenase -0.45
    6 PP_4722 Transcription elongation factor GreA -0.45
    7 PP_1370 Glycosyl transferase, group 1 family protein -0.44
    8 PP_1795 conserved protein of unknown function -0.43
    9 PP_3957 choline/carnitine/betaine transporter BetTC -0.41
    10 PP_1226 pre-queuosine 0 synthase -0.41
    11 PP_4859 Transcriptional regulator, TetR family -0.41
    12 PP_0697 ribosomal-protein-S18-alanine N-acetyltransferase -0.40
    13 PP_1321 ClpXP protease specificity-enhancing factor -0.40
    14 PP_0247 Osmolarity sensor protein EnvZ -0.40
    15 PP_0832 S-adenosylmethionine:tRNA ribosyltransferase-isomerase -0.40
    16 PP_4900 epoxyqueuosine reductase -0.40
    17 PP_2852 putative Sulfatase domain protein -0.40
    18 PP_4475 succinylglutamate desuccinylase -0.39
    19 PP_0123 DNA polymerase I, 5 -0.38
    20 PP_2448 Gamma-glutamylputrescine oxidase (EC 1.4.3.-) (from data) -0.38

    Or look for positive cofitness