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  • Negative cofitness for PP_4952 from Pseudomonas putida KT2440

    ATP-dependent RNA helicase, specific for 23S rRNA
    SEED: ATP-dependent 23S rRNA helicase DbpA
    KEGG: ATP-independent RNA helicase DbpA

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1795 conserved protein of unknown function -0.19
    2 PP_3616 conserved membrane protein of unknown function -0.17
    3 PP_4121 NADH-quinone oxidoreductase subunit C/D -0.17
    4 PP_3248 Dyp-type peroxidase family protein -0.15
    5 PP_1320 stringent starvation protein A -0.15
    6 PP_1370 Glycosyl transferase, group 1 family protein -0.15
    7 PP_4124 NADH-quinone oxidoreductase subunit G -0.15
    8 PP_1786 putative Glycosyl transferase -0.14
    9 PP_4999 dihydroorotase-like protein -0.14
    10 PP_4120 NADH-quinone oxidoreductase subunit B -0.14
    11 PP_2000 amidophosphoribosyl transferase -0.14
    12 PP_4993 Glutathione synthetase -0.14
    13 PP_3026 putative Phage recombinase -0.13
    14 PP_4129 NADH:ubiquinone oxidoreductase, membrane subunit L -0.13
    15 PP_4724 Carbamoyl-phosphate synthase small chain -0.13
    16 PP_2929 Carboxynorspermidine/carboxyspermidine decarboxylase -0.13
    17 PP_1793 Glycosyl transferase, group 2 family protein -0.13
    18 PP_2136 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase -0.13
    19 PP_2682 Fe-containing alcohol dehydrogenase -0.13
    20 PP_4723 Carbamoyl-phosphate synthase large chain -0.13

    Or look for positive cofitness