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  • Negative cofitness for PP_4946 from Pseudomonas putida KT2440

    sodium/L-proline transporter
    SEED: Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter
    KEGG: sodium/proline symporter

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -0.47
    2 PP_5639 conserved exported protein of unknown function -0.44
    3 PP_0725 conserved hypothetical TPR repeat protein -0.43
    4 PP_5217 Polyphosphate kinase -0.42
    5 PP_0570 lipoprotein of unknown function -0.41
    6 PP_1656 ATP:GTP 3'-pyrophosphotransferase -0.40
    7 PP_1650 Sensor protein GacS -0.39
    8 PP_4099 two-componenent system BarA/UvrY - regulatory subunit -0.39
    9 PP_2231 putative permease of the drug/metabolite transporter (DMT) superfamily -0.38
    10 PP_0405 conserved protein of unknown function -0.38
    11 PP_5058 Carboxy-terminal-processing protease -0.37
    12 PP_3417 D-gluconate transporter -0.37
    13 PP_1626 DNA mismatch repair protein MutS -0.36
    14 PP_4785 conserved exported protein of unknown function -0.36
    15 PP_0958 phospholipid ABC transporter ATP-binding subunit -0.35
    16 PP_0434 Anhydro-N-acetylmuramic acid kinase -0.35
    17 PP_t49 tRNA-Met -0.35
    18 PP_2032 putative ATPase -0.35
    19 PP_0789 N-acetyl-anhydromuramyl-L-alanine-amidase -0.35
    20 PP_5113 predicted Zn-dependent peptidases -0.34

    Or look for positive cofitness