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  • Negative cofitness for PP_4860 from Pseudomonas putida KT2440

    putative Mannose-6-phosphate isomerase
    SEED: Mannose-6-phosphate isomerase (EC 5.3.1.8)
    KEGG: mannose-6-phosphate isomerase

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_4515 Transcriptional regulator, MarR family -0.46
    2 PP_0434 Anhydro-N-acetylmuramic acid kinase -0.34
    3 PP_0928 K+-dependent Na+/Ca+ exchanger related-protein -0.33
    4 PP_1918 septation protein -0.33
    5 PP_1355 Muropeptide permease AmpG -0.32
    6 PP_1803 UDP-sugar epimerase -0.31
    7 PP_0405 conserved protein of unknown function -0.31
    8 PP_3627 conserved protein of unknown function -0.30
    9 PP_1776 Mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase -0.30
    10 PP_1805 Polysaccharide biosynthesis protein -0.29
    11 PP_1798 Outer membrane efflux protein -0.29
    12 PP_1801 Glycosyl transferase WbpY -0.29
    13 PP_1800 Oxidoreductase Rmd -0.28
    14 PP_1799 GDP-mannose 4,6-dehydratase -0.28
    15 PP_1627 conserved protein of unknown function -0.27
    16 PP_0789 N-acetyl-anhydromuramyl-L-alanine-amidase -0.27
    17 PP_1797 HlyD family secretion protein -0.27
    18 PP_1777 phosphomannomutase -0.27
    19 PP_1775 Metallo-beta-lactamase family protein -0.27
    20 PP_3769 conserved exported protein of unknown function -0.27

    Or look for positive cofitness