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  • Negative cofitness for PP_4768 from Pseudomonas putida KT2440

    Exonuclease
    SEED: DNA polymerase III alpha subunit (EC 2.7.7.7)
    KEGG: DNA polymerase III subunit epsilon

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_2971 transposase -0.19
    2 PP_4904 Flagellar motor rotation protein -0.15
    3 PP_4390 flagellar basal-body rod protein FlgC -0.15
    4 PP_0274 putative transcriptional regulator containing HTH domain -0.14
    5 PP_2697 putative oxidoreductase containing a flavin reductase domain -0.14
    6 PP_0903 conserved protein of unknown function -0.14
    7 PP_5374 Choline/carnitine/betaine transporter family protein -0.14
    8 PP_4391 flagellar basal-body rod protein FlgB -0.14
    9 PP_4905 Flagellar motor rotation protein -0.13
    10 PP_0994 putative RNA polymerase sigma factor -0.13
    11 PP_4780 putative Acyl-CoA dehydrogenase -0.13
    12 PP_5157 conserved exported protein of unknown function -0.13
    13 PP_0553 Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system -0.13
    14 PP_2989 Oxidoreductase, short chain dehydrogenase/reductase family -0.13
    15 PP_4048 conserved protein of unknown function -0.13
    16 PP_2801 gamma-aminobutyraldehyde dehydrogenase -0.13
    17 PP_5502 ribosome modulation factor -0.13
    18 PP_4386 flagellar basal-body rod protein FlgF -0.13
    19 PP_2716 arsenate reductase -0.13
    20 PP_4162 conserved membrane protein of unknown function -0.12

    Or look for positive cofitness