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  • Negative cofitness for PP_4710 from Pseudomonas putida KT2440

    tRNA pseudouridine 55 synthase
    SEED: tRNA pseudouridine synthase B (EC 4.2.1.70)
    KEGG: tRNA pseudouridine synthase B

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_2096 fused 23S rRNA m2G2445 methyltransferase and 23S rRNA m7G2069 methyltransferase -0.53
    2 PP_1798 Outer membrane efflux protein -0.52
    3 PP_1627 conserved protein of unknown function -0.52
    4 PP_0066 Ribosomal RNA small subunit methyltransferase B -0.51
    5 PP_5283 periplasmic dipeptide transport protein -0.51
    6 PP_5284 UPF0758 protein PP_5284 -0.50
    7 PP_1797 HlyD family secretion protein -0.49
    8 PP_3627 conserved protein of unknown function -0.49
    9 PP_0540 conserved inner membrane protein -0.48
    10 PP_1777 phosphomannomutase -0.48
    11 PP_1807 2-dehydro-3-deoxyphosphooctonate aldolase -0.48
    12 PP_4971 putative Outer membrane-bound lytic murein transglycolase A -0.45
    13 PP_1523 conserved protein of unknown function -0.45
    14 PP_1774 conserved exported protein of unknown function -0.45
    15 PP_2148 transcription-repair coupling factor -0.44
    16 PP_1663 conserved exported protein of unknown function -0.44
    17 PP_5279 conserved protein of unknown function -0.42
    18 PP_1803 UDP-sugar epimerase -0.42
    19 PP_1871 Protease HtpX -0.41
    20 PP_1075 glycerol kinase -0.41

    Or look for positive cofitness