• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for PP_4685 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: Regulator of competence-specific genes
    KEGG: DNA transformation protein and related proteins

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_2144 Transcriptional regulator, TetR family -0.28
    2 PP_1623 RNA polymerase, sigma S (sigma 38) factor -0.26
    3 PP_4629 Sensory box protein -0.26
    4 PP_1734 Probable septum site-determining protein MinC -0.26
    5 PP_0191 Transcriptional regulatory protein AlgQ -0.25
    6 PP_1058 conserved protein of unknown function -0.25
    7 PP_2387 conserved protein of unknown function -0.25
    8 PP_4804 RlpA-like lipoprotein -0.25
    9 PP_4726 Chaperone protein DnaJ -0.24
    10 PP_1733 membrane ATPase of the MinC-MinD-MinE system -0.24
    11 PP_4902 Oligoribonuclease -0.24
    12 PP_0397 protein kinase -0.24
    13 PP_0547 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase -0.24
    14 PP_4204 antitoxin of the type II toxin-antitoxin MqsRA system and DNA-binding transcriptional repressor -0.23
    15 PP_0395 putative type IV piliation protein -0.23
    16 PP_0396 conserved protein of unknown function -0.23
    17 PP_4332 Chemotaxis protein CheW -0.23
    18 PP_0719 ribosome-associated potassium-dependent informational ATP/GTPase -0.23
    19 PP_5045 tRNA sulfurtransferase -0.23
    20 PP_0872 Peptide chain release factor 3 -0.23

    Or look for positive cofitness