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  • Negative cofitness for PP_4648 from Pseudomonas putida KT2440

    Ribosomal RNA large subunit methyltransferase G
    SEED: 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-)
    KEGG: ribosomal RNA small subunit methyltransferase C

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1798 Outer membrane efflux protein -0.34
    2 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -0.33
    3 PP_0066 Ribosomal RNA small subunit methyltransferase B -0.32
    4 PP_1627 conserved protein of unknown function -0.31
    5 PP_3627 conserved protein of unknown function -0.31
    6 PP_1871 Protease HtpX -0.29
    7 PP_0540 conserved inner membrane protein -0.28
    8 PP_4495 aromatic amino acid transport protein -0.28
    9 PP_1797 HlyD family secretion protein -0.28
    10 PP_2032 putative ATPase -0.28
    11 PP_1789 Hydrolase, haloacid dehalogenase-like family -0.27
    12 PP_1626 DNA mismatch repair protein MutS -0.27
    13 PP_0405 conserved protein of unknown function -0.27
    14 PP_0789 N-acetyl-anhydromuramyl-L-alanine-amidase -0.27
    15 PP_1770 3-phosphoshikimate 1-carboxyvinyltransferase -0.27
    16 PP_1663 conserved exported protein of unknown function -0.27
    17 PP_1803 UDP-sugar epimerase -0.26
    18 PP_1774 conserved exported protein of unknown function -0.26
    19 PP_1355 Muropeptide permease AmpG -0.26
    20 PP_1791 putative Aldolase/synthase -0.26

    Or look for positive cofitness