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  • Negative cofitness for PP_4644 from Pseudomonas putida KT2440

    DNA repair enzyme
    SEED: DNA repair protein RadA
    KEGG: DNA repair protein RadA/Sms

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_0534 putative Transcriptional regulator PfeR -0.21
    2 PP_5265 Xanthine phosphoribosyltransferase -0.19
    3 PP_0883 glycine-glutamate dipeptide porin -0.18
    4 PP_2198 aldose sugar dehydrogenase -0.18
    5 PP_5424 conserved protein of unknown function -0.18
    6 PP_5144 conserved protein of unknown function -0.17
    7 PP_5406 transposase -0.17
    8 PP_3398 putative Curli fiber surface-exposed nucleator CsgB -0.17
    9 PP_4160 K+ transporting ATPase, KdpB subunit -0.17
    10 PP_3581 conserved membrane protein of unknown function -0.17
    11 PP_4841 putative Urea ABC transporter, periplasmic protein -0.16
    12 PP_1056 putative Iron-chelator utilization protein -0.16
    13 PP_4797 conserved protein of unknown function -0.16
    14 PP_2127 Sensor histidine kinase -0.16
    15 PP_3589 serine:H+ symport permease, threonine-insensitive -0.16
    16 PP_1019 carbohydrate-selective porin -0.16
    17 PP_0054 conserved membrane protein of unknown function -0.16
    18 PP_2091 putative Serine/threonine-protein kinase -0.16
    19 PP_1896 putative ABC transporter - permease subunit -0.15
    20 PP_5330 Major facilitator family transporter -0.15

    Or look for positive cofitness