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  • Negative cofitness for PP_4591 from Pseudomonas putida KT2440

    Ribonuclease D
    SEED: Ribonuclease D (EC 3.1.26.3)
    KEGG: ribonuclease D

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1781 putative O-acyltransferase -0.31
    2 PP_4246 Periplasmic binding protein -0.28
    3 PP_0574 DNA-binding response regulator, LuxR family -0.26
    4 PP_4924 Serine protease, subtilase family -0.25
    5 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -0.24
    6 PP_1761 diguanylate cyclase with phosphodiesterase domain -0.23
    7 PP_0026 putative cobalt/cadmium/zinc exporter -0.23
    8 PP_1656 ATP:GTP 3'-pyrophosphotransferase -0.23
    9 PP_4100 Transcriptional regulator, Cro/CI family -0.22
    10 PP_0033 putative undecaprenyl-glycosyl transferase -0.21
    11 PP_2683 putative sensory box histidine kinase/response regulator -0.21
    12 PP_4974 NhaP-type Na+/H+ and K+/H+ antiporters -0.21
    13 PP_5403 conserved protein of unknown function -0.21
    14 PP_1104 AotO-related protein -0.21
    15 PP_1072 Leucine-rich repeat domain protein -0.20
    16 PP_5651 conserved protein of unknown function -0.20
    17 PP_5060 conserved protein of unknown function -0.20
    18 PP_0016 conserved hypothetical protein -0.20
    19 PP_4964 D-erythrose 4-phosphate dehydrogenase -0.20
    20 PP_0049 conserved protein of unknown function -0.20

    Or look for positive cofitness