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  • Negative cofitness for PP_4576 from Pseudomonas putida KT2440

    allophanate hydrolase subunit
    SEED: Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -0.31
    2 PP_1656 ATP:GTP 3'-pyrophosphotransferase -0.29
    3 PP_1761 diguanylate cyclase with phosphodiesterase domain -0.25
    4 PP_0725 conserved hypothetical TPR repeat protein -0.24
    5 PP_4171 conserved exported protein of unknown function -0.24
    6 PP_1650 Sensor protein GacS -0.24
    7 PP_4099 two-componenent system BarA/UvrY - regulatory subunit -0.23
    8 PP_4246 Periplasmic binding protein -0.23
    9 PP_5112 putative processin peptidase -0.22
    10 PP_5639 conserved exported protein of unknown function -0.22
    11 PP_4063 putative Long-chain-fatty-acid-CoA ligase -0.22
    12 PP_5058 Carboxy-terminal-processing protease -0.21
    13 PP_4100 Transcriptional regulator, Cro/CI family -0.20
    14 PP_4495 aromatic amino acid transport protein -0.20
    15 PP_2007 P-47-related protein -0.19
    16 PP_2231 putative permease of the drug/metabolite transporter (DMT) superfamily -0.18
    17 PP_5144 conserved protein of unknown function -0.18
    18 PP_5113 predicted Zn-dependent peptidases -0.18
    19 PP_0115 hydroperoxidase - self catalytic heme d synthase -0.18
    20 PP_4535 conserved protein of unknown function -0.18

    Or look for positive cofitness