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  • Negative cofitness for PP_4559 from Pseudomonas putida KT2440

    peptide deformylase
    SEED: Peptide deformylase (EC 3.5.1.88)
    KEGG: peptide deformylase

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_3790 diaminopimelate epimerase -0.26
    2 PP_1110 serine acetyltransferase -0.25
    3 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding -0.24
    4 PP_1109 Transcriptional regulator, GntR family -0.24
    5 PP_1111 putative Synthetase -0.24
    6 PP_2714 Sensor histidine kinase -0.24
    7 PP_3376 putative phosphonate dehydrogenase -0.22
    8 PP_3244 Magnesium transporter, MgtC family -0.22
    9 PP_1348 putative MutT/nudix family protein/thiamine-phosphate pyrophosphorylase -0.21
    10 PP_2677 conserved exported protein of unknown function -0.21
    11 PP_0506 putative ABC efflux transporter, permease protein -0.21
    12 PP_2645 magnesium transporter, ATP-dependent -0.21
    13 PP_0608 putative type 4 fimbrial biogenesis protein -0.21
    14 PP_3788 putative Non-ribosomal peptide synthetase -0.20
    15 PP_2646 conserved protein of unknown function -0.19
    16 PP_3787 conserved protein of unknown function -0.19
    17 PP_4446 putative Group II intron-encoding maturase -0.19
    18 PP_3371 Sensor histidine kinase -0.18
    19 PP_t64 tRNA-Gly -0.18
    20 PP_4922 Phosphomethylpyrimidine synthase -0.18

    Or look for positive cofitness