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  • Negative cofitness for PP_4550 from Pseudomonas putida KT2440

    long-chain-fatty-acid/CoA ligase
    SEED: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
    KEGG: long-chain acyl-CoA synthetase

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_5003 poly(3-hydroxyalkanoate) polymerase 1 -0.41
    2 PP_5006 Transcriptional regulator, TetR family -0.36
    3 PP_5005 Poly(3-hydroxyalkanoate) polymerase 2 -0.33
    4 PP_2664 putative hybrid sensor and regulator, histidine kinase -0.28
    5 PP_2663 conserved protein of unknown function -0.27
    6 PP_2662 conserved exported protein of unknown function -0.25
    7 PP_1113 Pyridoxal-phosphate dependent enzyme family protein -0.24
    8 PP_5053 Protein-export protein SecB -0.23
    9 PP_1761 diguanylate cyclase with phosphodiesterase domain -0.23
    10 PP_1875 Sensor histidine kinase/response regulator -0.22
    11 PP_2666 conserved exported protein of unknown function -0.19
    12 PP_2144 Transcriptional regulator, TetR family -0.19
    13 PP_2437 putative Acyl-CoA dehydrogenase -0.19
    14 PP_1080 putative oxidoreductase molybdopterin-binding -0.18
    15 PP_4785 conserved exported protein of unknown function -0.18
    16 PP_1238 putative Lipoprotein -0.18
    17 PP_2082 phosphoenolpyruvate synthetase -0.16
    18 PP_2889 putative Transmembrane regulator PrtR -0.16
    19 PP_1224 periplasmic subunit of the TolQRA transport system -0.16
    20 PP_5075 glutamate synthase (NADPH) beta subunit -0.16

    Or look for positive cofitness