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  • Negative cofitness for PP_4546 from Pseudomonas putida KT2440

    ATP-dependent helicase HrpA
    SEED: ATP-dependent RNA helicase HrpA (EC 3.6.4.13)

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_4217 outer membrane ferripyoverdine receptor FpvA, TonB-dependent -0.39
    2 PP_1798 Outer membrane efflux protein -0.39
    3 PP_0066 Ribosomal RNA small subunit methyltransferase B -0.37
    4 PP_1627 conserved protein of unknown function -0.35
    5 PP_4971 putative Outer membrane-bound lytic murein transglycolase A -0.35
    6 PP_3627 conserved protein of unknown function -0.34
    7 PP_0540 conserved inner membrane protein -0.33
    8 PP_t49 tRNA-Met -0.31
    9 PP_1774 conserved exported protein of unknown function -0.31
    10 PP_1789 Hydrolase, haloacid dehalogenase-like family -0.31
    11 PP_1797 HlyD family secretion protein -0.31
    12 PP_1918 septation protein -0.30
    13 PP_1523 conserved protein of unknown function -0.30
    14 PP_4781 Sensor histidine kinase -0.30
    15 PP_1803 UDP-sugar epimerase -0.30
    16 PP_1301 quality control serine endoprotease DegS -0.29
    17 PP_0928 K+-dependent Na+/Ca+ exchanger related-protein -0.28
    18 PP_1776 Mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase -0.28
    19 PP_1871 Protease HtpX -0.28
    20 PP_1777 phosphomannomutase -0.28

    Or look for positive cofitness