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  • Negative cofitness for PP_4516 from Pseudomonas putida KT2440

    ATP-dependent DNA 3
    SEED: ATP-dependent DNA helicase RecQ
    KEGG: ATP-dependent DNA helicase RecQ

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_0033 putative undecaprenyl-glycosyl transferase -0.22
    2 PP_5370 Oxidoreductase-related protein -0.21
    3 PP_4461 Major facilitator family transporter -0.21
    4 PP_4974 NhaP-type Na+/H+ and K+/H+ antiporters -0.20
    5 PP_3678 conserved protein of unknown function -0.19
    6 PP_5060 conserved protein of unknown function -0.19
    7 PP_5200 proline aminopeptidase P II -0.19
    8 PP_1951 Oxidoreductase, short chain dehydrogenase/reductase family -0.19
    9 PP_0016 conserved hypothetical protein -0.18
    10 PP_4300 putative hydroxypyruvate reductase -0.18
    11 PP_4434 D-amino acid dehydrogenase 1 small subunit -0.18
    12 PP_4742 Type I restriction-modification system, S subunit -0.18
    13 PP_4458 putative Opine ABC transporter, periplasmic binding protein -0.18
    14 PP_5037 lipocalin family lipoprotein -0.18
    15 PP_0539 glucose-regulated peptidase -0.18
    16 PP_4450 Phosphoglycerate mutase family protein -0.18
    17 PP_0675 glutamate dehydrogenase, NADP-dependent -0.17
    18 PP_0506 putative ABC efflux transporter, permease protein -0.17
    19 PP_1630 Regulatory protein RecX -0.17
    20 PP_1174 conserved protein of unknown function -0.17

    Or look for positive cofitness