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  • Negative cofitness for PP_4484 from Pseudomonas putida KT2440

    histidine / lysine / arginine / ornithine ABC transporter - permease subunit
    SEED: Arginine/ornithine ABC transporter, permease protein AotM
    KEGG: arginine/ornithine transport system permease protein

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_2660 conserved protein of unknown function -0.35
    2 PP_5055 Sulfurtransferase -0.30
    3 PP_4050 glycogen synthase -0.29
    4 PP_0917 Chromosome initiation inhibitor -0.29
    5 PP_4789 heat shock protein, Co2+ and Mg2+ efflux protein -0.28
    6 PP_1234 putative permease -0.26
    7 PP_0575 conserved membrane protein of unknown function -0.26
    8 PP_0980 Probable cytosol aminopeptidase -0.26
    9 PP_4710 tRNA pseudouridine 55 synthase -0.24
    10 PP_0680 ATP-dependent protease-like protein -0.23
    11 PP_4803 D-alanyl-D-alanine carboxypeptidase -0.23
    12 PP_0916 Amino acid transporter LysE -0.22
    13 PP_3244 Magnesium transporter, MgtC family -0.22
    14 PP_1669 NLP/P60 family protein -0.22
    15 PP_4401 branched-chain alpha-keto acid dehydrogenase complex, alpha subunit -0.22
    16 PP_4255 cytochrome c oxidase subunit I, cbb3-type -0.21
    17 PP_0516 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II -0.21
    18 PP_4722 Transcription elongation factor GreA -0.21
    19 PP_5204 conserved protein of unknown function -0.20
    20 PP_4900 epoxyqueuosine reductase -0.20

    Or look for positive cofitness