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  • Negative cofitness for PP_4466 from Pseudomonas putida KT2440

    Dioxygenase, TauD/TfdA family
    SEED: Alpha-ketoglutarate-dependent taurine dioxygenase (EC 1.14.11.17)
    KEGG: taurine dioxygenase

    Computing cofitness values with 1005 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_4389 Flagellar basal-body rod modification protein FlgD -0.24
    2 PP_4994 conserved protein of unknown function -0.24
    3 PP_1898 MotA/TolQ/ExbB proton channel family protein -0.24
    4 PP_4520 conserved protein of unknown function -0.23
    5 PP_4388 Flagellar hook protein FlgE -0.22
    6 PP_2764 FMN reductase (NADPH) -0.22
    7 PP_2752 conserved exported protein of unknown function -0.22
    8 PP_4361 Flagellar hook-length control protein FliK -0.22
    9 PP_4384 Flagellar L-ring protein -0.21
    10 PP_4148 putative inner membrane ABC transporter permease protein -0.21
    11 PP_4386 flagellar basal-body rod protein FlgF -0.21
    12 PP_4365 Flagellar protein FliJ -0.21
    13 PP_2043 conserved exported protein of unknown function -0.21
    14 PP_2034 conserved membrane protein of unknown function -0.21
    15 PP_2535 putative inner membrane transport protein -0.21
    16 PP_4366 flagellum-specific ATP synthase -0.20
    17 PP_2378 Fe/S biogenesis protein NfuA -0.20
    18 PP_4391 flagellar basal-body rod protein FlgB -0.20
    19 PP_4390 flagellar basal-body rod protein FlgC -0.20
    20 PP_4341 RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons -0.20

    Or look for positive cofitness