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  • Negative cofitness for PP_4429 from Pseudomonas putida KT2440

    Transcriptional regulator, GntR family
    SEED: Transcriptional regulator GabR of GABA utilization (GntR family with aminotransferase-like domain)

    Computing cofitness values with 1005 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_4376 flagellar filament capping protein -0.38
    2 PP_4389 Flagellar basal-body rod modification protein FlgD -0.38
    3 PP_4380 Flagellar hook-associated protein FlgL -0.38
    4 PP_4352 flagellin export apparatus, substrate specificity protein -0.36
    5 PP_4384 Flagellar L-ring protein -0.36
    6 PP_4378 flagellin, filament structural protein -0.36
    7 PP_4385 flagellar basal-body rod protein FlgG -0.36
    8 PP_4381 Flagellar hook-associated protein FlgK -0.36
    9 PP_4353 Flagellar biosynthetic protein fliR -0.36
    10 PP_4366 flagellum-specific ATP synthase -0.36
    11 PP_4388 Flagellar hook protein FlgE -0.36
    12 PP_4386 flagellar basal-body rod protein FlgF -0.35
    13 PP_4382 Peptidoglycan hydrolase FlgJ -0.35
    14 PP_4361 Flagellar hook-length control protein FliK -0.35
    15 PP_4396 conserved protein of unknown function -0.35
    16 PP_4367 Flagellar assembly protein FliH -0.35
    17 PP_4344 flagellar export pore protein -0.35
    18 PP_4341 RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons -0.34
    19 PP_4370 Flagellar hook-basal body complex protein FliE -0.34
    20 PP_4369 Flagellar M-ring protein -0.34

    Or look for positive cofitness