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  • Negative cofitness for PP_4340 from Pseudomonas putida KT2440

    response regulator for chemotactic signal transduction
    SEED: Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY
    KEGG: two-component system, chemotaxis family, response regulator CheY

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_4946 sodium/L-proline transporter -0.25
    2 PP_2413 GGDEF family protein -0.23
    3 PP_4959 diguanylate cyclase -0.22
    4 PP_0803 Protein secretion ABC efflux system, membrane fusion protein -0.22
    5 PP_3685 conserved protein of unknown function -0.22
    6 PP_1109 Transcriptional regulator, GntR family -0.22
    7 PP_4246 Periplasmic binding protein -0.22
    8 PP_4723 Carbamoyl-phosphate synthase large chain -0.22
    9 PP_1940 Methyl-accepting chemotaxis transducer -0.22
    10 PP_1111 putative Synthetase -0.22
    11 PP_0804 Protein secretion ABC efflux system, permease and ATP-binding protein -0.21
    12 PP_0691 Glutamate 5-kinase -0.20
    13 PP_0046 tyrosine-specific outer membrane porin D -0.20
    14 PP_1110 serine acetyltransferase -0.20
    15 PP_4999 dihydroorotase-like protein -0.20
    16 PP_1937 putative helicase -0.19
    17 PP_1364 conserved exported protein of unknown function -0.19
    18 PP_0563 Response regulator -0.19
    19 PP_4724 Carbamoyl-phosphate synthase small chain -0.18
    20 PP_2362 putative usher protein -0.18

    Or look for positive cofitness