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  • Negative cofitness for PP_4258 from Pseudomonas putida KT2440

    cytochrome c oxidase subunit, cbb3-type
    SEED: Cytochrome c oxidase subunit CcoP (EC 1.9.3.1)
    KEGG: cb-type cytochrome c oxidase subunit III

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1761 diguanylate cyclase with phosphodiesterase domain -0.20
    2 PP_2724 conserved protein of unknown function -0.16
    3 PP_5276 Phospholipase D family protein -0.15
    4 PP_0245 putative transcriptional accessory protein -0.15
    5 PP_4515 Transcriptional regulator, MarR family -0.15
    6 PP_4495 aromatic amino acid transport protein -0.15
    7 PP_4171 conserved exported protein of unknown function -0.15
    8 PP_1561 putative Phage holin -0.15
    9 PP_1650 Sensor protein GacS -0.15
    10 PP_3042 putative Terminase, large subunit -0.14
    11 PP_4611 RNA polymerase sigma-70 factor, ECF subfamily -0.14
    12 PP_4099 two-componenent system BarA/UvrY - regulatory subunit -0.14
    13 PP_2483 conserved protein of unknown function -0.14
    14 PP_1797 HlyD family secretion protein -0.14
    15 PP_5284 UPF0758 protein PP_5284 -0.14
    16 PP_1810 conserved protein of unknown function -0.14
    17 PP_1742 conserved inner membrane protein of unknown function -0.13
    18 PP_4769 conserved protein of unknown function -0.13
    19 PP_5023 Amino acid ABC transporter, permease protein -0.13
    20 PP_3671 Oxidoreductase, aldo/keto reductase family -0.13

    Or look for positive cofitness