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  • Negative cofitness for PP_4236 from Pseudomonas putida KT2440

    putative Thiol:disulfide interchange protein dsbE
    SEED: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -0.28
    2 PP_1656 ATP:GTP 3'-pyrophosphotransferase -0.25
    3 PP_4924 Serine protease, subtilase family -0.22
    4 PP_1728 conserved membrane protein of unknown function -0.21
    5 PP_4219 non-ribosomal peptide synthetase -0.21
    6 PP_2231 putative permease of the drug/metabolite transporter (DMT) superfamily -0.20
    7 PP_4243 non-ribosomal peptide synthase (subunit of ferribactin synthase) -0.20
    8 PP_0049 conserved protein of unknown function -0.20
    9 PP_1386 Probable efflux pump periplasmic linker TtgA -0.20
    10 PP_1385 Probable efflux pump membrane transporter TtgB -0.19
    11 PP_1650 Sensor protein GacS -0.19
    12 PP_4099 two-componenent system BarA/UvrY - regulatory subunit -0.18
    13 PP_1770 3-phosphoshikimate 1-carboxyvinyltransferase -0.18
    14 PP_0077 choline-sulfatase -0.18
    15 PP_5639 conserved exported protein of unknown function -0.18
    16 PP_3417 D-gluconate transporter -0.18
    17 PP_5242 Sensor histidine kinase/GAF domain protein -0.18
    18 PP_3997 putative Glycosyl transferase -0.18
    19 PP_2032 putative ATPase -0.18
    20 PP_0020 hypothetical protein -0.17

    Or look for positive cofitness