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  • Negative cofitness for PP_4149 from Pseudomonas putida KT2440

    putative inner membrane ABC transporter permease protein
    SEED: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)
    KEGG: microcin C transport system permease protein

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1427 RNA polymerase sigma E factor -0.25
    2 PP_4948 Acyl-CoA dehydrogenase family protein -0.25
    3 PP_1627 conserved protein of unknown function -0.25
    4 PP_1798 Outer membrane efflux protein -0.24
    5 PP_2032 putative ATPase -0.21
    6 PP_1774 conserved exported protein of unknown function -0.21
    7 PP_1803 UDP-sugar epimerase -0.21
    8 PP_1797 HlyD family secretion protein -0.21
    9 PP_2027 conserved exported protein of unknown function -0.20
    10 PP_3627 conserved protein of unknown function -0.20
    11 PP_4781 Sensor histidine kinase -0.20
    12 PP_0066 Ribosomal RNA small subunit methyltransferase B -0.20
    13 PP_1807 2-dehydro-3-deoxyphosphooctonate aldolase -0.20
    14 PP_1036 membrane-bound lytic murein transglycosylase F -0.20
    15 PP_2030 conserved protein of unknown function -0.19
    16 PP_1770 3-phosphoshikimate 1-carboxyvinyltransferase -0.19
    17 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -0.18
    18 PP_5284 UPF0758 protein PP_5284 -0.18
    19 PP_1821 Glutathione S-transferase family protein -0.18
    20 PP_1204 putative Lipoprotein -0.18

    Or look for positive cofitness