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  • Negative cofitness for PP_4140 from Pseudomonas putida KT2440

    lysine decarboxylase
    SEED: Lysine decarboxylase, inducible (EC 4.1.1.18)
    KEGG: lysine decarboxylase

    Computing cofitness values with 1005 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1238 putative Lipoprotein -0.18
    2 PP_2319 conserved protein of unknown function -0.17
    3 PP_0998 conserved protein of unknown function -0.17
    4 PP_3640 Transcriptional regulator, AraC family -0.16
    5 PP_4265 DNA-binding transcriptional dual regulator -0.16
    6 PP_4937 toluene tolerance protein -0.16
    7 PP_2379 putative cytochrome oxidase biogenesis protein -0.15
    8 PP_0247 Osmolarity sensor protein EnvZ -0.15
    9 PP_5365 putative fatty acid methyltransferase -0.15
    10 PP_4475 succinylglutamate desuccinylase -0.15
    11 PP_0856 conserved lipoprotein of unknown function -0.15
    12 PP_2320 conserved exported protein of unknown function -0.15
    13 PP_4721 conserved membrane protein of unknown function -0.15
    14 PP_1787 conserved protein of unknown function -0.15
    15 PP_0704 RNA polymerase sigma-70 factor, ECF subfamily -0.14
    16 PP_1001 arginine deiminase -0.14
    17 PP_1002 arginine/ornithine antiporter -0.14
    18 PP_4343 Flagellar biosynthesis protein FlhF -0.14
    19 PP_2449 conserved protein of unknown function -0.14
    20 PP_4004 DNA translocase FtsK -0.14

    Or look for positive cofitness