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  • Negative cofitness for PP_4130 from Pseudomonas putida KT2440

    NADH:ubiquinone oxidoreductase, membrane subunit M
    SEED: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
    KEGG: NADH dehydrogenase I subunit M

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_4050 glycogen synthase -0.36
    2 PP_4217 outer membrane ferripyoverdine receptor FpvA, TonB-dependent -0.32
    3 PP_4246 Periplasmic binding protein -0.31
    4 PP_3376 putative phosphonate dehydrogenase -0.29
    5 PP_0066 Ribosomal RNA small subunit methyltransferase B -0.29
    6 PP_4971 putative Outer membrane-bound lytic murein transglycolase A -0.27
    7 PP_1798 Outer membrane efflux protein -0.27
    8 PP_5283 periplasmic dipeptide transport protein -0.26
    9 PP_5233 ammonium transporter AmtB -0.25
    10 PP_0540 conserved inner membrane protein -0.25
    11 PP_4692 putative aspartate/tyrosine/aromatic aminotransferase -0.25
    12 PP_5070 ParA family protein -0.24
    13 PP_1627 conserved protein of unknown function -0.24
    14 PP_1803 UDP-sugar epimerase -0.23
    15 PP_t49 tRNA-Met -0.23
    16 PP_1301 quality control serine endoprotease DegS -0.23
    17 PP_0889 conserved exported protein of unknown function -0.23
    18 PP_4495 aromatic amino acid transport protein -0.22
    19 PP_1776 Mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase -0.22
    20 PP_0245 putative transcriptional accessory protein -0.22

    Or look for positive cofitness