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  • Negative cofitness for PP_4079 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: Type VI secretion lipoprotein/VasD
    KEGG: type VI secretion system protein VasD

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_2808 putative Oxidoreductase -0.23
    2 PP_2567 Hydrolase, alpha/beta fold family -0.21
    3 PP_0281 Amino acid ABC transporter, permease protein -0.20
    4 PP_5486 conserved protein of unknown function -0.20
    5 PP_1349 ATP:cob(I)alamin adenosyltransferase -0.19
    6 PP_3427 Multidrug efflux RND outer membrane protein OprN -0.18
    7 PP_1302 putative metal-binding hydrolase-oxidase enzyme -0.18
    8 PP_5053 Protein-export protein SecB -0.18
    9 PP_4150 microcin C transporter - ATP binding subunit -0.18
    10 PP_2971 transposase -0.18
    11 PP_2269 putative N-acetylmuramoyl-L-alanine amidase -0.17
    12 PP_2293 DNA maturase B -0.17
    13 PP_4849 putative DnaK protein -0.17
    14 PP_2718 arsenic resistance transcriptional regulator -0.17
    15 PP_4172 conserved exported protein of unknown function -0.17
    16 PP_4339 Protein phosphatase CheZ -0.17
    17 PP_2642 Transcriptional regulator, GntR family -0.16
    18 PP_2801 gamma-aminobutyraldehyde dehydrogenase -0.16
    19 PP_0312 electron transfer flavoprotein, alpha subunit -0.16
    20 PP_2689 putative Endoribonuclease -0.16

    Or look for positive cofitness