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  • Negative cofitness for PP_4074 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: Uncharacterized protein ImpB
    KEGG: type VI secretion system protein ImpB

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_2318 acyl-CoA thioesterase I/protease I/lysophospholipase L1 -0.19
    2 PP_1087 Outer membrane protein, OmpA family -0.18
    3 PP_3302 RND efflux transporter -0.15
    4 PP_3259 Acyl-CoA dehydrogenase-related protein -0.15
    5 PP_4904 Flagellar motor rotation protein -0.15
    6 PP_0429 Oxidoreductase, short chain dehydrogenase/reductase family -0.15
    7 PP_3252 Modification methylase, HemK family -0.15
    8 PP_0850 Dual-specificity RNA methyltransferase RlmN -0.14
    9 PP_4538 FMN-dependent NADH-azoreductase 2 -0.14
    10 PP_5502 ribosome modulation factor -0.14
    11 PP_t11 tRNA-Lys -0.14
    12 PP_0503 Major facilitator family transporter -0.14
    13 PP_4344 flagellar export pore protein -0.13
    14 PP_4343 Flagellar biosynthesis protein FlhF -0.13
    15 PP_4353 Flagellar biosynthetic protein fliR -0.13
    16 PP_1042 Type II secretion system protein K -0.13
    17 PP_0590 Transcriptional regulator, ArsR family -0.13
    18 PP_5580 protein of unknown function -0.13
    19 PP_3874 conserved protein of unknown function -0.13
    20 PP_5337 LysR family transcriptional regulator -0.13

    Or look for positive cofitness