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  • Negative cofitness for PP_4073 from Pseudomonas putida KT2440

    conserved exported protein of unknown function
    SEED: Type VI secretion protein VasI
    KEGG: type VI secretion system protein VasI

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_5310 junction-specific ATP-dependent DNA helicase -0.20
    2 PP_4880 exoribonuclease R -0.18
    3 PP_4204 antitoxin of the type II toxin-antitoxin MqsRA system and DNA-binding transcriptional repressor -0.17
    4 PP_1783 dTDP-glucose pyrophosphorylase -0.17
    5 PP_0080 conserved protein of unknown function -0.17
    6 PP_4124 NADH-quinone oxidoreductase subunit G -0.16
    7 PP_3104 conserved protein of unknown function -0.16
    8 PP_5580 protein of unknown function -0.16
    9 PP_5353 conserved exported protein of unknown function -0.15
    10 PP_4121 NADH-quinone oxidoreductase subunit C/D -0.15
    11 PP_2146 helicase SNF2/RAD54 family -0.15
    12 PP_1217 Holliday junction ATP-dependent DNA helicase RuvB -0.15
    13 PP_4902 Oligoribonuclease -0.15
    14 PP_0164 conserved protein of unknown function -0.15
    15 PP_3073 3-hydroxybutyrate dehydrogenase -0.15
    16 PP_4215 pyoverdine biosynthesis related protein -0.15
    17 PP_0804 Protein secretion ABC efflux system, permease and ATP-binding protein -0.15
    18 PP_4471 Magnesium transporter -0.14
    19 PP_2319 conserved protein of unknown function -0.14
    20 PP_0806 putative Surface adhesion protein -0.14

    Or look for positive cofitness