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  • Negative cofitness for PP_4060 from Pseudomonas putida KT2440

    Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase
    SEED: Alpha-amylase (EC 3.2.1.1)

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_2231 putative permease of the drug/metabolite transporter (DMT) superfamily -0.33
    2 PP_3831 conserved protein of unknown function -0.33
    3 PP_4171 conserved exported protein of unknown function -0.32
    4 PP_2000 amidophosphoribosyl transferase -0.31
    5 PP_2889 putative Transmembrane regulator PrtR -0.31
    6 PP_4964 D-erythrose 4-phosphate dehydrogenase -0.31
    7 PP_1650 Sensor protein GacS -0.30
    8 PP_4099 two-componenent system BarA/UvrY - regulatory subunit -0.30
    9 PP_4700 pantothenate synthetase -0.29
    10 PP_4629 Sensory box protein -0.29
    11 PP_0574 DNA-binding response regulator, LuxR family -0.29
    12 PP_1783 dTDP-glucose pyrophosphorylase -0.29
    13 PP_1353 conserved membrane protein of unknown function -0.29
    14 PP_4126 NADH-quinone oxidoreductase subunit I -0.28
    15 PP_1656 ATP:GTP 3'-pyrophosphotransferase -0.28
    16 PP_4100 Transcriptional regulator, Cro/CI family -0.28
    17 PP_0833 queuine tRNA-ribosyltransferase -0.27
    18 PP_2387 conserved protein of unknown function -0.26
    19 PP_0856 conserved lipoprotein of unknown function -0.26
    20 PP_0719 ribosome-associated potassium-dependent informational ATP/GTPase -0.26

    Or look for positive cofitness