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  • Negative cofitness for PP_4058 from Pseudomonas putida KT2440

    1,4-alpha-glucan branching enzyme
    SEED: 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)
    KEGG: 1,4-alpha-glucan branching enzyme

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1761 diguanylate cyclase with phosphodiesterase domain -0.36
    2 PP_2389 conserved protein of unknown function -0.31
    3 PP_4246 Periplasmic binding protein -0.28
    4 PP_5405 transposase -0.28
    5 PP_0049 conserved protein of unknown function -0.27
    6 PP_2390 Transcriptional regulator, LysR family -0.26
    7 PP_1650 Sensor protein GacS -0.25
    8 PP_4099 two-componenent system BarA/UvrY - regulatory subunit -0.24
    9 PP_4171 conserved exported protein of unknown function -0.24
    10 PP_2388 Transporter, LysE family -0.23
    11 PP_0016 conserved hypothetical protein -0.23
    12 PP_5404 Transposition protein, TnsC-related protein -0.22
    13 PP_4100 Transcriptional regulator, Cro/CI family -0.22
    14 PP_5360 conserved protein of unknown function -0.22
    15 PP_5043 putative PhoPQ-activated pathogenicity-related protein -0.22
    16 PP_1080 putative oxidoreductase molybdopterin-binding -0.21
    17 PP_0033 putative undecaprenyl-glycosyl transferase -0.20
    18 PP_4658 putative methyl-accepting chemotaxis protein -0.20
    19 PP_4272 conserved membrane protein of unknown function -0.20
    20 PP_5060 conserved protein of unknown function -0.20

    Or look for positive cofitness