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  • Negative cofitness for PP_4010 from Pseudomonas putida KT2440

    DNA replication inhibitor
    SEED: Cold shock protein CspD
    KEGG: cold shock protein (beta-ribbon, CspA family)

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_4171 conserved exported protein of unknown function -0.26
    2 PP_4100 Transcriptional regulator, Cro/CI family -0.24
    3 PP_0574 DNA-binding response regulator, LuxR family -0.24
    4 PP_4373 Transcriptional regulator FleQ -0.22
    5 PP_1761 diguanylate cyclase with phosphodiesterase domain -0.22
    6 PP_1113 Pyridoxal-phosphate dependent enzyme family protein -0.21
    7 PP_4246 Periplasmic binding protein -0.20
    8 PP_1117 conserved protein of unknown function -0.20
    9 PP_0355 Response regulator -0.20
    10 PP_1364 conserved exported protein of unknown function -0.20
    11 PP_4629 Sensory box protein -0.19
    12 PP_0166 HlyD family secretion protein -0.19
    13 PP_0168 putative surface adhesion protein -0.18
    14 PP_0167 Toxin secretion ATP-binding protein -0.18
    15 PP_1112 conserved membrane protein of unknown function -0.18
    16 PP_4173 Sensor histidine kinase/response regulator -0.18
    17 PP_5053 Protein-export protein SecB -0.17
    18 PP_4519 Agglutination protein -0.17
    19 PP_0165 GGDEF domain protein -0.17
    20 PP_0856 conserved lipoprotein of unknown function -0.17

    Or look for positive cofitness